It was a quiet night on Yoshi's Island. The Yoshi's were sound asleep, perfectly calm. Suddenly, a Koopa Clown Car flew down with the Koopalings in it. Kamek rode next to them on his broom. He swooped down towards the field, and dropped a net over all the Yoshis. He then tied it up and rode back up. All the Yoshis panicked. But only a few Yoshis were able to slip through the net and fall to the ground. Watching the Clown Car leave, the Yoshis chased after it.
Meanwhile, Kamek went around the island, kidnapping all of the babies while they slept. His army of Toadies held onto the babies in little sacks, while they began to return to Bowser. All of a sudden, an army of Storks came and started attacking the Toadies. They dropped their babies in panic, which all landed coincidentally in the Clown Car. The Koopalings decided to drop the babies all across the island, and drop themselves off as well. The Yoshis, now determined to stop Kamek, decided to make a rescue squad to help the babies!